"Species delimitation"

Guided by the idea that DNA is informative at all taxonomic levels, the delimitation of species and subspecies should be based on divergence times (as recommended for allopatric forms by Price, 2008 and Hudson & Price, 2014; but see Winkler, 2021). Thus species status might be attributed to lineages that are at least 2 million years old (Price, 2008; Hudson & Price, 2014), and subspecies status to lineages that are at least 1 million years old. This pragmatic approach is based on the assumption that the speciation process represents a continuum that can only be arbitrarily divided. It follows that species cannot be detected, but have to be defined. Although speciation doesn’t occur at a constant rate, it should be correlated over longer periods of time. 

Age should be the sole operational criterion in defining species and subspecies in practice. At present, however, avian taxonomists tend to integrate everything - except time. Other traits (morphology, bioacoustics, behaviour, habitat, distribution, and possibly others) are still required to investigate the underlying evolutionary processes of speciation. 

Accepting the primacy of age substantially reduces the level of subjectivity in species-delimitation decisions. Once delimiting ages for species and subspecies are agreed upon, species-level taxonomies should be automatically generated by computer programs. 

Finally, to answer the philosophical question “What is a species?”, a multitude of species concepts have been developed. Kevin de Queiroz (2007) later merged them into the “General Lineage Species Concept”. 

 

References/Literature

Alström P, van Linschooten J, Donald PF, Sundev G, Mohammadi Z, Ghorbani F, Shafaeipour A, van den Berg A, Robb M, Aliabadian M, Wei C, Lei F, Oxelman B, and Olsson U (2021a), Multiple species delimitation approaches applied to the avian lark genus AlaudalaMolPhylogenetEvol. 154, 106994(pdf) 

 

Alström P, Rasmussen PC, Xia C, Zhang L, Liu C, Magnusson J, Shafaeipour A, and Olsson U (2021b), Morphology, vocalisations, and mitochondrial DNA suggest that the Graceful Prinia is two species, Ornithology 138(2), ukab014. (pdf) 

 

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Barrowclough TG (2019), The evolutionary origin of species, Oxford University Press. (link)

 

Barrowclough TG, Cracraft J, Klicka J, and Zink RM (2016), How many kinds of birds are there and why does it matter? PLoS ONE 11, 1-15. (pdf)

 

Berv JS, Campagna L, Feo TJ, Castro-Astor I, Ribas CC, Prum RO, and Lovette IJ (2021), Genomic phylogeography of the White-crowned Manakin Pseudopipra pipra (Aves: Pipridae) illuminates a continental-scale radiation out of the Andes, MolPhylogenetEvol(pdf)

 

Buainain N, Maximiano MFA, Ferreira M, Aleixo A, Faircloth BC, Brumfield RB, Cracraft J, and Ribas CC (2021), Multiple species and deep genomic differences despite little phenotypic differentiation in an ancient Neotropical songbird, Tunchiornis ochraceiceps (Sclater, 1860) (Aves: Vireonidae), MolPhylogenetEvol. 162. (abstract)

 

Cadena CD, and Zapata F (2021), The genomic revolution and species delimitation in birds (and other organisms): why phenotypes should not be overlooked, Auk 138(2), ukaa069. (abstract)

 

Carstens BC, Pelletier TA, Reid NM, and Satler JD (2013), How to fail at species delimitation, MolEcol. 22, 4369- 4383. (pdf)

 

Cicero C, Mason NA, Jiménez RA, Wait DR, Wang-Claypool CY, and Bowie RCK (2021), Integrative taxonomy and geographic sampling underlie successful species delimitation, Ornithology 138(2), ukab009. (abstract)

 

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de Queiroz K (2007), Species concepts and species delimitation, SystBiol. 56(6), 879-886. (pdf)

 

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Edwards SV, Kingan SB, Calkins JD, Balakrishnan CN, Jennings WB, Swanson WJ, and Sorenson MD (2005), Speciation in birds: genes, geography, and sexual selection, Proc. Natl Acad. Sci. USA 102, 6550-6557. (pdf)


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Hudson EJ, and Price DT (2014), Pervasive reinforcement and the role of sexual selection in biological speciation, JHered. 105, 821-833. (pdf)


Johnson O, Howard JT, and Brumfield RT (2021), Systematics of a Neotropical clade of dead-leaf-foraging antwrens (Aves: Thamnophilidae; Epinecrophylla), Mol. Phylogenet. Evol. 154, e106962. (abstract)


Joseph L (2021), Species limits in birds: Australian perspectives on interrelated challenges of allopatry, introgression of mitochondrial DNA, recent speciation, and selection, Ornithology 138(2), ukab012. (pdf)

 

Knowles LL, and Carstens BC (2007), Delimiting species without monophyletic gene trees, SystBiol. 56(6), 887-895. (pdf)


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Marques Silva S, Ribas CC, and Aleixo A (2021), Recent population differentiation in the habitat specialist Glossy Antshrike (Aves: Thamnophilidae) across Amazonian seasonally flooded forests, EcolEvol(pdf)

 

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Price T (2007/2008), Speciation in birds, Roberts & Company Publishers, Greenwood Village, CO, USA. (link)

 

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Stervander M, Hansson B, Olsson U, Hulme MF, Ottosson U, and Alström P (2020), Molecular species delimitation of larks (Aves: Alaudidae), and integrative taxonomy of the genus Calandrella, with the description of a range-restricted African relic taxon, Diversity 12, 428. (pdf)


Sukumaran J, Holder MT, and Knowles LL (2021), Incorporating the speciation process into species delimitation, PLoS Comput. Biol., e1008924. (pdf)


Tobias JA, Donald PF, Martin RW, Butchart SHM, and Collar NJ (2021), Performance of a points-based scoring system for assessing species limits in birds, Ornithology 138(2), ukab016. (pdf)


Vázquez-Miranda H, and Barker FK (2021), Autosomal, sex-linked and mitochondrial loci resolve evolutionary relationships among wrens in the genus Campylorhynchus, Mol. Phylogenet. Evol. 163, e107242. (abstract)


Winkler K (2021), An overview of speciation and species limits in birds, Auk 138(2), ukab006. (pdf) 

 

Winkler K, and Rasmussen PC (2021), Species limits and taxonomy in birds, Auk 138(2), ukab017. (abstract) 


Zink RM, and Barrowclough GF (2008), Mitochondrial DNA under siege in avian phylogeography, MolEcol. 17, 2107-2121. (pdf) 


Zink RM, Groth JG, Vázquez-Miranda H, and Barrowclough GF (2013), Phylogeography of the California Gnatcatcher (Polioptila californica) using multilocus DNA sequences and ecological niche modeling: implications for conservation, Auk 130, 449-458. (pdf)


Zink RM, Groth JG, Vázquez-Miranda H, and Barrowclough GF (2016), Geographic variation, null hypotheses, and subspecies limits in the California Gnatcacher: a response to McCormack and Maley, Auk 133, 59-68. (pdf)